What this answers
This calculator answers three questions at once: does Factor A affect the outcome, does Factor B affect the outcome, and do the two factors interact, meaning Factor A's effect depends on which level of Factor B you are looking at (and vice versa)?
How it is calculated
Total variability is decomposed into a Factor A main effect, a Factor B main effect, an A-by-B interaction, and leftover error, each with its own sum of squares and F test against the error term. This calculator requires a balanced design (an equal number of replicate observations in every cell) since balanced and unbalanced factorial designs need genuinely different sum-of-squares decompositions; an unbalanced design is out of scope here.
Worked example
For a 2 by 2 design where Factor A adds a consistent effect and Factor B adds a separate consistent effect, with no interaction between them, the resulting sums of squares split cleanly between the two main effects, leaving a small interaction sum of squares reflecting only the noise between replicates, exactly reflecting the additive structure of the example data.
Assumption audit
What this result does not mean
A significant main effect in the presence of a significant interaction should be interpreted cautiously, since an interaction means the "average" effect of one factor can obscure very different effects at different levels of the other factor; examine the cell means directly in that situation rather than relying on the main effect alone.
Limitations
This calculator only supports a balanced design with equal cell sizes; an unbalanced design with unequal replicate counts per cell requires a Type II or Type III sum-of-squares approach this calculator does not implement.